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Nutrient deficiencies on GLP-1 medications: what the research shows

How often vitamin D, B12, iron and other shortfalls are diagnosed after starting a GLP-1 medication, why they happen, and what to ask your prescriber.

Last reviewed September 16, 2026. Written by Understory Nutrition from the studies listed under Sources and not reviewed by a clinician. Understory sells a supplement for adults taking GLP-1 medications.

Do GLP-1 medications cause nutrient deficiencies?

GLP-1 medications don't appear to cause poor nutrient absorption; the bigger risk is eating much less [1]. In a claims study of 461,382 adults newly prescribed these drugs between 2017 and 2021 (most had type 2 diabetes), 22.4% were diagnosed with a nutritional deficiency within 12 months, most often vitamin D [2]. Whether you need lab tests is a question for your prescriber.

Key numbers

  • Vitamin D deficiency was the most common diagnosis: 7.5% of adults had one within 6 months of starting a GLP-1 medication, and 13.6% had a vitamin D deficiency diagnosis within 12 months [2].
  • Compared with matched adults taking metformin alone, adults who added a GLP-1 had more deficiency diagnoses at 12 months: 18.6% vs 16.5% [2].
  • In a 69-person food-record study, 98.6% of GLP-1 users got less than the Daily Value of vitamin D from food, and 88.4% less than the Daily Value of iron [3].
  • No universally accepted screening protocol exists yet, so testing is a decision to make with your prescriber [2, 1].

How common are nutrient deficiencies on GLP-1 medications?

In a claims study of 461,382 adults, 12.7% were diagnosed with a nutritional deficiency or related complication within 6 months of starting a GLP-1 medication, and 22.4% within 12 months [2]. Most had type 2 diabetes and started dulaglutide, semaglutide or liraglutide between 2017 and 2021, so results for newer drugs such as tirzepatide may differ.

New diagnoses among 461,382 adults after starting a GLP-1 medication [2]
DiagnosisBy 6 monthsBy 12 monthsBar chart of the same values
Any nutritional deficiency or related complication12.7%22.4%
Vitamin D deficiency7.5%13.6%
Dehydration1.8%3.5%
Iron deficiency anemia1.6%3.2%
Muscle loss1.5%3.0%
Other B-vitamin deficiency1.3%2.6%
Mineral deficiency0.4%0.8%
Protein-calorie malnutrition0.3%0.6%
Thiamine deficiency0.02%0.05%

Diagnoses come from insurance claims, so they count only shortfalls that were tested for and coded; the study authors say the figures likely capture the minimum [2].

The study also matched 4,505 adults with type 2 diabetes who added a GLP-1 to metformin against 4,505 similar adults on metformin alone. At 12 months, deficiency diagnoses were more common with the GLP-1 (18.6% vs 16.5%), with significant differences for vitamin D, thiamine and other B vitamins. At 6 months, only other B-vitamin deficiencies differed significantly [2].

One finding cuts the other way. Deficiencies were recorded more often in people who saw a dietitian within 6 months of starting (29.8% vs 21.8% at 12 months), which the authors say may reflect more testing and higher-risk patients being referred, rather than harm from dietitian care [2].

Why do nutrient shortfalls happen on a GLP-1?

Nutrient shortfalls on a GLP-1 mostly come from eating less, and less variety. A 2025 perspective in the International Journal of Obesity links early fullness, nausea and changing food preferences to lower intake of iron, vitamin B12, vitamin D, calcium and thiamine [1]. In a food-record study of 69 GLP-1 users, average intake from food fell below the Daily Value for vitamin D, iron, calcium and magnesium [3].

Feeding-lab studies show how steep the drop can be. At week 12, adults with obesity on weekly semaglutide injections ate 24% fewer calories than on placebo, and adults with type 2 diabetes on oral semaglutide ate 38.9% fewer [4, 5].

In the food-record study, whose participants were mostly women averaging 50 years old and mostly on semaglutide or tirzepatide, 98.6% took in less than the Daily Value of vitamin D from food, 89.9% less magnesium and 88.4% less iron. Average vitamin D intake was 4 mcg a day against a 20 mcg Daily Value, while B vitamins, zinc and selenium were adequate [3].

Keep two limits in mind: that study compared intake with food-label Daily Values rather than age- and sex-specific needs, and it counted food only, not supplements. It was funded by GNC, a supplement retailer [3].

Is vitamin D deficiency common on GLP-1 medications like Ozempic?

Vitamin D deficiency is the most frequently diagnosed deficiency after starting a GLP-1 medication. In the claims study, 7.5% of adults had a vitamin D deficiency diagnosis within 6 months and 13.6% within 12 months [2]. In a separate food-record study, GLP-1 users averaged 4 mcg of vitamin D a day from food, a fifth of the 20 mcg Daily Value [3].

Vitamin D deficiency is common in people with obesity, partly because vitamin D is held in fat tissue and partly because of limited sun exposure, and it may worsen during weight loss without enough intake [2].

The RDA for adults is 15 mcg (600 IU) a day through age 70 and 20 mcg (800 IU) after 70 [6].

What about vitamin B12 on a GLP-1?

Vitamin B12 intake from food was adequate in the food-record study, where GLP-1 users averaged 4.9 mcg a day against an adult RDA of 2.4 mcg [3, 7]. The B12 issues worth raising involve other medications and testing. Metformin, which many people with type 2 diabetes take, might reduce B12 absorption [7], and semaglutide may skew B12 lab results toward falsely low levels in people also taking metformin [2].

Diagnoses of other B-vitamin deficiencies did rise in the claims study, from 1.3% at 6 months to 2.6% at 12 months, and were more common than in matched adults on metformin alone (2.3% vs 1.4%) [2].

Does iron deficiency happen on GLP-1 medications?

Iron deficiency anemia was diagnosed in 3.2% of adults within 12 months of starting a GLP-1 medication [2]. In the matched comparison, it was no more common than in adults taking metformin alone (2.8% vs 3.0%) [2]. Intake may still run low: GLP-1 users in a food-record study averaged 12.1 mg of iron a day from food, and 88.4% fell below the 18 mg Daily Value [3].

That 18 mg Daily Value is more than many adults need. The RDA is 18 mg a day for women 19 to 50 and 8 mg for men and for women 51 and older [8]. The 2025 perspective names people who menstruate, along with older adults, as groups for whom a baseline nutrition assessment matters most [1].

More iron isn't automatically better, so ask before adding a supplement that contains it.

Are thiamine and protein a concern too?

Thiamine deficiency was rare in the claims study, diagnosed in fewer than 1 in 1,000 adults within 12 months, though more often than in matched adults on metformin alone [2]. Protein intake often falls short: in a food-record study, only 43% of GLP-1 users reached 1.2 g of protein per kilogram of adjusted body weight, the low end of the range the authors cite for preserving muscle during weight loss [3].

Muscle loss was diagnosed in 3.0% of adults within 12 months in the claims study [2]. The 2025 perspective recommends prioritizing high-quality protein, ideally alongside resistance training [1]. For targets, food strategies and how to protect muscle, see our guide to protein on a GLP-1 medication.

Which lab tests should I ask about on a GLP-1?

No universally accepted screening protocol exists yet, so testing is a decision to make with your prescriber [2]. The claims study authors list vitamin B12, 25-hydroxy vitamin D, iron and folate as tests that can screen for shortfalls [2], and a 2025 perspective recommends a baseline nutrition assessment, especially for older adults and people who menstruate [1].

Useful things to bring to that appointment:

  • A list of every medication and supplement you take. Metformin matters here because it might lower B12 levels [7].
  • Any new symptoms, including ones that seem unrelated.
  • What you eat on a typical day now, not before you started.

Is there an official nutrition guideline for GLP-1 medications?

Not one that is universally accepted for nutrition screening and monitoring [2]. Four medical and nutrition societies published a joint advisory on nutrition priorities for GLP-1 therapy in 2025 [9], and a 2025 perspective calls for international GLP-1-specific nutrition guidelines, pointing out that bariatric surgery care already includes routine micronutrient screening [1].

A 2024 review in the journal Obesity also covered nutritional considerations with anti-obesity medications [10].

Should I take a supplement while on a GLP-1?

Whether you need a supplement depends on your diet, lab results and other medications, so check with your prescriber first. In the absence of a screening standard, a 2025 International Journal of Obesity perspective suggests a once-daily complete multivitamin and mineral with iron, zinc, copper, B12 and folic acid as a pragmatic interim approach [1]. Food still matters: people in the food-record study fell short on fruit, vegetables and dairy [3].

Check the iron dose. For men and for women over 50, the RDA for iron is 8 mg a day, so a supplement with 18 mg may give you more than you need [8].

When to contact your prescriber instead

Some symptoms need medical attention, not a supplement. Contact your prescriber or get care for:

  • Vomiting that won't stop, or trouble keeping fluids down
  • Signs of dehydration, such as dizziness, fainting or very dark urine
  • Severe or persistent belly pain
  • Bloody stools, or black, tar-like stools (iron supplements can darken stool harmlessly, so mention it if you take one)
  • No bowel movements with a swollen, hard belly

Dehydration was diagnosed in 3.5% of adults within 12 months in the claims study, and the authors recommend watching hydration closely in the first weeks and after dose increases [2]. This list isn't complete; if something feels wrong, get checked.

Where Understory fits

Understory Nutrition sells the Daily Micronutrient & Digestive Protocol, a two-capsule daily supplement designed to be taken alongside a GLP-1 medication. It contains 18 mg of iron as ferrous bisglycinate, vitamin B12, folate, vitamin D3 and zinc, plus digestive-comfort ingredients [11]. Because we sell it, weigh this page against the studies themselves. It isn't right for everyone, especially people who don't need extra iron.

See the full formula and who shouldn't take it

What these studies can't tell you

  • The 461,382-person study used insurance claims, so it counts only deficiencies that were tested for and coded, and it has no data on supplement use. Most participants had type 2 diabetes, prescriptions started between 2017 and 2021, and the study was funded by Abbott [2].
  • The food-record study had 69 participants recruited online, relied on self-reported food records, compared intake with label Daily Values, and was funded by GNC [3].
  • The International Journal of Obesity article is an expert perspective, not a trial or guideline, and one author reports honoraria from Novo Nordisk and Eli Lilly [1].
  • No study here tested whether a supplement prevents deficiencies in people on GLP-1 medications.

Sources

  1. Spreckley M, Ruggiero CF, Brown A. Bridging the nutrition guidance gap for GLP-1 receptor agonist therapy assisted weight loss: lessons from bariatric surgery. International Journal of Obesity. 2026;50:265-267. Published online November 15, 2025. doi:10.1038/s41366-025-01952-w. Expert perspective, not a trial or guideline. One author reports honoraria from Novo Nordisk and Eli Lilly.
  2. Butsch WS, Sulo S, Chang AT, et al. Nutritional deficiencies and muscle loss in adults with type 2 diabetes using GLP-1 receptor agonists: a retrospective observational study. Obesity Pillars. 2025;15:100186. doi:10.1016/j.obpill.2025.100186 Full text. Insurance claims from 461,382 adults newly prescribed a GLP-1 medication, 2017 to 2021; 80.5% had type 2 diabetes. Funded by Abbott.
  3. Johnson B, Milstead M, Thomas O, et al. Investigating nutrient intake during use of glucagon-like peptide-1 receptor agonist: a cross-sectional study. Frontiers in Nutrition. 2025;12:1566498. doi:10.3389/fnut.2025.1566498 Full text. Three-day food records from 69 adults using a GLP-1 medication, recruited online in 2024. Funded by GNC Holdings; all authors are GNC employees.
  4. Blundell J, Finlayson G, Axelsen M, et al. Effects of once-weekly semaglutide on appetite, energy intake, control of eating, food preference and body weight in subjects with obesity. Diabetes, Obesity and Metabolism. 2017;19:1242-1251. doi:10.1111/dom.12932 PubMed.
  5. Gibbons C, Blundell J, Tetens Hoff S, et al. Effects of oral semaglutide on energy intake, food preference, appetite, control of eating and body weight in subjects with type 2 diabetes. Diabetes, Obesity and Metabolism. 2021;23:581-588. doi:10.1111/dom.14255 PubMed.
  6. NIH Office of Dietary Supplements. Vitamin D: Fact Sheet for Health Professionals. ods.od.nih.gov.
  7. NIH Office of Dietary Supplements. Vitamin B12: Fact Sheets for Health Professionals and for Consumers. Health professional sheet Consumer sheet.
  8. NIH Office of Dietary Supplements. Iron: Fact Sheet for Health Professionals. ods.od.nih.gov.
  9. Mozaffarian D, Agarwal M, Aggarwal M, et al. Nutritional priorities to support GLP-1 therapy for obesity: a joint advisory from the American College of Lifestyle Medicine, the American Society for Nutrition, the Obesity Medicine Association, and The Obesity Society. Obesity. 2025;33:1475-1503. doi:10.1002/oby.24336 Full text.
  10. Almandoz JP, Wadden TA, Tewksbury C, et al. Nutritional considerations with antiobesity medications. Obesity. 2024;32:1613-1631. doi:10.1002/oby.24067 PubMed.
  11. Understory Nutrition. Daily Micronutrient & Digestive Protocol, Supplement Facts label. Product page.

These statements have not been evaluated by the Food and Drug Administration. Understory Nutrition products are not intended to diagnose, treat, cure, or prevent any disease. This page is general information, not medical advice. Talk with your prescriber before changing your diet, supplements or medication.

These statements have not been evaluated by the Food and Drug Administration. These products are not intended to diagnose, treat, cure, or prevent any disease, and are not a substitute for medical advice. Talk to your healthcare provider before starting any new supplement, especially alongside a prescription medication. Understory Nutrition products are intended to be used alongside, not in place of, GLP‑1 receptor agonist medication.

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